Publications

Publication

Single nuclei sequencing reveals C4 photosynthesis is based on rewiring of ancestral cell identity networks

Date: 27 October 2023

Contributors: Joseph Swift Leonie H. Luginbuehl, Tina Schreier, Ruth M. Donald, Travis Lee, Joseph Nery, Joseph R. Ecker, Julian M. Hibberd.

Journal: bioRxiv

Publication

CRISPR gene editing to improve crop resistance to parasitic plants

Date: 25 October 2023

Contributors: Jhu MY, Ellison EE, Sinha NR.

Journal: Frontiers in Genome Editing

Publication

Lessons from relatives: C4 photosynthesis enhances CO2 assimilation during the low-light phase of fluctuations

Date: 3 October 2023

Contributors: Arce-Cubas L, Vath RL, Bernardo EL, Sales CRG, Burnett AC, Kromdijk J

Journal: Plant Physiology

Publication

The genetic basis of plants' battle against witchweeds: linking immune responses to distinct resistance mechanisms

Date: 13 September 2023

Contributors: Jhu MY, Kawa D, Brady SM

Journal: Journal of experimental botany

Publication

The battle within: How pathogen effectors suppress NLR-mediated immunity

Date: 7 August 2023

Contributors: Chih-hang Wu, Lida Derevnina

Journal: Current Opinion in Plant Biology

Publication

Constitutive activation of a nuclear-localized calcium channel complex in Medicago truncatula

Date: 24 July 2023

Contributors: Haiyue Liu, Jie-Shun Lin, Zhenpeng Luo, Jongho Sun, Xiaowei Huang, Yang Yang, Ji Xu, Yong-Fei Wang, Peng Zhang, Giles E. D. Oldroyd, and Fang Xie

Journal: PNAS

Publication

Unlocking the development- and physiology-altering ‘effector toolbox’ of plant-parasitic nematodes

Date: 10 July 2023

Contributors: Beth Molloy, Thomas Baum, Sebastian Eves-van der Akker

Journal: Trends in Parasitology

Publication

Arbuscular mycorrhizal fungi induce lateral root development in angiosperms via a conserved set of MAMP receptors.

Date: 6 June 2023

Contributors: Chiu CH, Roszak P, Orvošová M, Paszkowski U.

Journal: Current Biology

Publication

A highly contiguous genome assembly reveals sources of genomic novelty in the symbiotic fungus Rhizophagus irregularis.

Date: 1 June 2023

Contributors: Manley BF, Lotharukpong JS, Barrera-Redondo J, Llewellyn T, Yildirir G, Sperschneider J, Corradi N,

Journal: G3 Genes|Genomes|Genetics,

Publication

Cycles of satellite and retrotransposon evolution in Arabidopsis centromeres

Date: 17 May 2023

Contributors: Wlodzimierez, P, Rabanal, F., Burns, R., Naish, M., Primetis, E., Scott, A., Mandakova, T., Gorringe, N., Tock, A.J., Holland, D., Fritschi, K., Habring, A., Lanz, C., Patel, C., Schlegel, T., Collenberg, M., Mielke, M., Nordborg, M., Roux, F., Shirsekar, G., Alonso-Blanco, C., Lysak, M.A., Novikova, P., Bousios, A.W., Weigel, D.W. and Henderson, I.R.

Journal: Nature

Publication

Resurrection of plant disease resistance proteins via helper NLR bioengineering

Date: 3 May 2023

Contributors: Mauricio P Contreras, Hsuan Pai, Muniyandi Selvaraj, AmirAli Toghani, David M Lawson, Yasin Tumtas, Cian Duggan, Enoch Lok Him Yuen, Clare E M Stevenson, Adeline Harant, Abbas Maqbool, Chih-Hang Wu, Tolga O Bozkurt, Sophien Kamoun, Lida Derevnina

Journal: Science Advances

Publication

Fungal plant pathogen "mutagenomics" reveals tagged and untagged mutations in Zymoseptoria tritici and identifies SSK2 as key morphogenesis and stress-responsive virulence factor

Date: 3 May 2023

Contributors: Blyth HR, Smith D, King R, Bayon C, Ashfield T, Walpole H, Venter E, Ray RV, Kanyuka K, Rudd JJ

Journal: Frontiers in Pant Science

Publication

Genetic analysis of global faba bean diversity, agronomic traits and selection signatures

Date: 19 April 2023

Contributors: Cathrine Kiel Skovbjerg, Deepti Angra, Tom Robertson‑Shersby‑Harvie, Jonathan Kreplak, Gabriel Keeble‑Gagnère, Sukhjiwan Kaur, Wolfgang Ecke, Alex Windhorst, Linda Kærgaard Nielsen, Andrea Schiemann, Jens Knudsen, Natalia Gutierrez, Vasiliki Tagkouli, Lavinia Ioana Fechete, Luc Janss, ·Jens Stougaard, Ahmed Warsame, Sheila Alves, Hamid Khazaei, Wolfgang Link, Ana Maria Torres, Donal Martin O’Sullivan, Stig Uggerhøj Andersen

Journal: Theoretical and Applied Genetics

Publication

Dancing to a different tune, can we switch from chemical to biological nitrogen fixation for sustainable food security?

Date: 14 March 2023

Contributors: Min-Yao Jhu,Giles E. D. Oldroyd

Journal: PLOS Biology

Publication

The giant diploid faba genome unlocks variation in a global protein crop.

Date: 8 March 2023

Contributors: Murukarthick Jayakodi, Agnieszka A. Golicz, Jonathan Kreplak, Lavinia I. Fechete, Deepti Angra, Petr Bednář, Elesandro Bornhofen, Hailin Zhang, Raphaël Boussageon, Sukhjiwan Kaur, Kwok Cheung, Jana Čížková, Heidrun Gundlach, Asis Hallab, Baptiste Imbert, Gabriel Keeble-Gagnère, Andrea Koblížková, Lucie Kobrlová, Petra Krejčí, Troels W. Mouritzen, Pavel Neumann, Marcin Nadzieja, Linda Kærgaard Nielsen, Petr Novák, Jihad Orabi, Sudharsan Padmarasu, Tom Robertson-Shersby-Harvie, Laura Ávila Robledillo, Andrea Schiemann, Jaakko Tanskanen, Petri Törönen, Ahmed O. Warsame, Alexander H. J. Wittenberg, Axel Himmelbach, Grégoire Aubert, Pierre-Emmanuel Courty, Jaroslav Doležel, Liisa U. Holm, Luc L. Janss, Hamid Khazaei, Jiří Macas, Martin Mascher, Petr Smýkal, Rod J. Snowdon, Nils Stein, Frederick L. Stoddard, Jens Stougaard, Nadim Tayeh, Ana M. Torres, Björn Usadel, Ingo Schubert, Donal Martin O’Sullivan, Alan H. Schulman & Stig Uggerhøj Andersen

Journal: Nature

Publication

Sensor NLR immune proteins activate oligomerization of their NRC helpers in response to plant pathogens

Date: 1 March 2023

Contributors: Mauricio P Contreras, Hsuan Pai, Yasin Tumtas, Cian Duggan, Enoch Lok Him Yuen, Angel Vergara Cruces, Jiorgos Kourelis, Hee-Kyung Ahn, Kim-Teng Lee, Chih-Hang Wu, Tolga O Bozkurt, Lida Derevnina, Sophien Kamoun

Journal: The EMBO Journal

Publication

An optimised transformation protocol for Anthoceros agrestis and three more hornwort species

Date: 23 February 2023

Contributors: Waller M; Frangedakis E; Marron A; Sauret-Gueto S; Rever J; Raja Rubenstein Sabbagh C; Hibberd J; Haseloff J; Renzaglia K; Szövényi P

Journal: The Plant Journal

Publication

Multi-trait ensemble genomic prediction and simulations of recurrent selection highlight importance of complex trait genetic architecture for long-term genetic gains in wheat

Date: 18 February 2023

Contributors: Fradgley N, Gardner KA, Bentley AR, Howell P, Ian J Mackay, Scott MF, Mott R, Cockram J

Journal: in silico Plants