Publications

Publication

A bipartite transcription factor module controlling expression in the bundle sheath of Arabidopsis thaliana

Date: 23 November 2020

Contributors: Patrick J. Dickinson, Jana Kneřová, Marek Szecówka, Sean R. Stevenson, Steven J. Burgess, Hugh Mulvey, Anne-Maarit Bågman, Allison Gaudinier, Siobhan M. Brady & Julian M. Hibberd

Journal: Nature Plants

Publication

Local accumulation of reactive oxygen species in the rice bundle sheath during high light stress can be independent of photosynthesis and mediated by NADPH oxidase

Date: 30 October 2020

Contributors: Haiyan Xiong, Lei Hua, Ivan Reyna-Llorens, Yi Shi, Kun-Ming Chen, Nicholas Smirnoff, Johannes Kromdijk, and Julian M. Hibberd

Journal: PNAS

Publication

Common components of the strigolactone and karrikin signaling pathways suppress root branching in Arabidopsis thaliana

Date: 20 July 2020

Contributors: Swarbreck SM, Mohammad-Sidik A, Davies JM

Journal: Plant Physiology

Publication

Identification and Quantification of Major Faba Bean Seed Proteins

Date: 17 July 2020

Contributors: Ahmed O. Warsame, Nicholas Michael, Donal M. O’Sullivan, Paola Tosi

Journal: Journal of Agricultural and Food Chemistry

Publication

SeedGerm: a cost-effective phenotyping platform for automated seed imaging and machine-learning based phenotypic analysis of crop seed germination

Date: 13 June 2020

Contributors: Colmer J, et al., Penfield S*, Zhou J*

Journal: New Phytologist

Publication

ASY1 acts as a dosage-dependent antagonist of telomere-led recombination and mediates crossover interference in Arabidopsis’

Date: 4 June 2020

Contributors: Lambing, C.A., Kuo, P.C., Tock, A.J., Topp, S.D. and Henderson I.R.

Journal: Proceedings of the National Academy of Sciences USA

Publication

Grain number and genotype drive nitrogen-dependent yield response in the C4 model Setaria italica (L.) P. Beauv.

Date: 25 March 2020

Contributors: Bandyopadhyay T, Swarbreck SM, Jaiswal V, Gupta R, Bentley AR, Griffiths H, Prasad M

Journal: Journal of Advanced Research

Publication

Fluorescent reporters for functional analysis in rice leaves

Date: 11 February 2020

Contributors: Leonie H. Luginbuehl, Sherif El-Sharnouby, Na Wang, and Julian M. Hibberd.

Journal: Plants direct

Publication

Reinforcement learning for sustainable agriculture

Date: 4 November 2019

Contributors: Jonathan Binas; Leonie Luginbuehl; Yoshua Bengio

Journal: ICML 2019 Workshop Climate Change: How Can AI Help.

Publication

A roadmap for lowering crop nitrogen requirement

Date: 8 October 2019

Contributors: Swarbreck SM, Wang M, Wang Y, Kindred D, Sylvester-Bradley R, Shi Weiming, Varinderpal-Singh, Bentley AR, Griffiths H

Journal: Trends in Plant Science

Publication

Combining computer vision and deep learning to enable ultra-scale aerial phenotyping and precision agriculture: a case study of lettuce

Date: 1 June 2019

Contributors: Bauer, A., Bostrom, A.G., Ball, J., Applegate, C., Cheng, T., Laycock, S., Rojas, S.M., Kirwan, J. and Zhou, J

Journal: Horticulture Research

Publication

Characterizing standard genetic parts and establishing common principles for engineering legume and cereal roots

Date: 25 April 2019

Contributors: Doreen Feike, Andrey V. Korolev, Eleni Soumpourou, Eiichi Murakami, Dugald Reid, Andrew Breakspear, Christian Rogers, Simona Radutoiu, Jens Stougaard, Wendy A. Harwood, Giles E. D. Oldroyd, J. Benjamin Miller

Journal: Plant Biotechnology Journal

School: Sainsbury Laboratory

Publication

CropSight: a scalable open and distributed data management system for crop phenotyping and IoT based crop management

Date: 31 January 2019

Contributors: Reynolds D, et al., Zhou J*

Journal: GigaScience

Publication

Photosystem II Subunit S overexpression increases the efficiency of water use in a field-grown crop

Date: 6 March 2018

Contributors: K Głowacka, J Kromdijk, K Kucera, J Xie, AP Cavanagh, L Leonelli

Journal: Nature communications

Publication

Massive crossover elevation via combination of HEI10 and recq4a recq4b during Arabidopsis meiosis

Date: 20 February 2018

Contributors: Serra, H., Lambing, C.A., Griffin, C.H., Topp, S.D., Nageswaran, D.C., Underwood, C.J., Ziolkowski, P.A., Seguela-Arnaud, M., Fernandes, J.B., Mercier, R. and Henderson, I.R.

Journal: Proceedings of the National Academy of Sciences USA

Publication

Ancient duons may underpin spatial patterning of gene expression in C4 leaves

Date: 5 February 2018

Contributors: Ivan Reyna-Llorens, Steven J. Burgess, Gregory Reeves, Pallavi Singh, Sean R. Stevenson, Ben P. Williams, Susan Stanley, and Julian M. Hibberd

Journal: PNAS

Publication

Speed breeding is a powerful tool to accelerate crop research and breeding

Date: 1 January 2018

Contributors: Amy Watson, Sreya Ghosh, Matthew J. Williams, William S. Cuddy, James Simmonds, María-Dolores Rey, M. Asyraf Md Hatta, Alison Hinchliffe, Andrew Steed, Daniel Reynolds, Nikolai M. Adamski, Andy Breakspear, Andrey Korolev, Tracey Rayner, Laura E. Dixon, Adnan Riaz, William Martin, Merrill Ryan, David Edwards, Jacqueline Batley, Harsh Raman, Jeremy Carter, Christian Rogers, Claire Domoney, Graham Moore, Wendy Harwood, Paul Nicholson, Mark J. Dieters, Ian H. DeLacy, Ji Zhou, Cristobal Uauy, Scott A. Boden, Robert F. Park, Brande B. H. Wulff & Lee T. Hickey

Journal: Nature Plants

Publication

Leaf-GP: an open and automated software application for measuring growth phenotypes for arabidopsis and wheat

Date: 22 December 2017

Contributors: Ji Zhou, Christopher Applegate, Albor Dobon Alonso, Daniel Reynolds, Simon Orford, Michal Mackiewicz, Simon Griffiths, Steven Penfield & Nick Pullen

Journal: Plant Methods volume